Detailed information of matrix profile MA1038.1

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Profile summary
Name: MYB3
Matrix ID: MA1038.1
Class: Tryptophan
Family: MYB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 22197883
Uniprot ID: Q9S9K9  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 230 191 74 1000 0 0 71 1000 188 59 260 ]
C [ 230 345 202 0 1000 1000 0 0 771 823 279 ]
G [ 230 191 74 0 0 0 0 0 20 59 176 ]
T [ 311 273 650 0 0 0 929 0 20 59 285 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1038.1 MA1038 1 MYB3 Arabidopsis thaliana
MYB Tryptophan
MA1038.2 MA1038 2 MYB3 Arabidopsis thaliana
MYB Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0529.1

ChIP-seq Centrality
-log(P-value): 870.251

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0529.1

ChIP-seq Centrality
-log(P-value): 823.149

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: