Detailed information of matrix profile MA1025.1

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Profile summary
Name: HBI1
Matrix ID: MA1025.1
Class: Basic
Family: bHLH
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 24550223
Uniprot ID: Q9ZPW3  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 322 118 21 936 0 95 0 0 108 313 229 229 ]
C [ 226 195 936 21 1000 0 0 0 762 315 313 229 ]
G [ 226 485 21 21 0 904 0 1000 106 240 229 313 ]
T [ 226 202 21 21 0 0 1000 0 24 132 229 229 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1025.1 MA1025 1 HBI1 Arabidopsis thaliana
bHLH Basic
MA1025.2 MA1025 2 HBI1 Arabidopsis thaliana
bHLH Basic
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: