Detailed information of matrix profile MA0992.1

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Profile summary
Name: ERF4
Matrix ID: MA0992.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 9756931
Uniprot ID: O80340  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 39 150 0 0 6 6 94 90 ]
C [ 39 131 988 12 83 952 115 225 ]
G [ 800 662 6 976 899 18 726 517 ]
T [ 123 56 6 12 12 24 65 169 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0992.1 MA0992 1 ERF4 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA0992.2 MA0992 2 ERF4 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA0992.3 MA0992 3 ERF4 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0335.1

ChIP-seq Centrality
-log(P-value): 4700.44

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0335.1

ChIP-seq Centrality
-log(P-value): 5179.13

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: