Detailed information of matrix profile MA0972.1

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Profile summary
Name: CCA1
Matrix ID: MA0972.1
Class: Tryptophan
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 19218364
Uniprot ID: P92973  
Source: 24477691
Comment:

Sequence logo

Frequency matrix

         
A [ 874 4 986 2 960 1 2 54 ]
C [ 14 0 1 1 5 10 37 10 ]
G [ 91 991 12 5 0 4 1 1 ]
T [ 21 5 1 992 35 985 960 934 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0972.1 MA0972 1 CCA1 Arabidopsis thaliana
Myb-related Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0453.1

ChIP-seq Centrality
-log(P-value): 1130.82

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0453.1

ChIP-seq Centrality
-log(P-value): 1081.44

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: