Detailed information of matrix profile MA0964.1

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Profile summary
Name: BIM1
Matrix ID: MA0964.1
Class: Basic
Family: bHLH
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 15680330
Uniprot ID: Q9LEZ3  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 219 126 582 59 140 1 3 375 147 257 ]
C [ 250 655 101 766 62 23 2 301 344 262 ]
G [ 281 101 184 23 795 0 990 148 242 257 ]
T [ 250 118 132 152 3 976 6 176 268 225 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0964.1 MA0964 1 BIM1 Arabidopsis thaliana
bHLH Basic
MA0964.2 MA0964 2 BIM1 Arabidopsis thaliana
bHLH Basic
MA0964.3 MA0964 3 BIM1 Arabidopsis thaliana
bHLH Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0300.1

ChIP-seq Centrality
-log(P-value): 924.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0300.1

ChIP-seq Centrality
-log(P-value): 887.257

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: