Detailed information of matrix profile MA0941.1

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Profile summary
Name: ABF2
Matrix ID: MA0941.1
Class: Basic
Family: Group
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 11005831
Uniprot ID: Q9M7Q4  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 312 371 59 942 19 82 0 159 21 202 350 231 231 ]
C [ 229 287 664 19 942 0 0 0 103 403 191 231 231 ]
G [ 229 130 59 19 19 917 0 840 177 120 268 231 308 ]
T [ 229 213 218 19 19 0 999 0 699 274 191 308 231 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0941.1 MA0941 1 ABF2 Arabidopsis thaliana
Group Basic
MA0941.2 MA0941 2 ABF2 Arabidopsis thaliana
Group Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0215.1

ChIP-seq Centrality
-log(P-value): 7773.86

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0215.1

ChIP-seq Centrality
-log(P-value): 7761.39

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: