Detailed information of matrix profile MA0938.1

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Profile summary
Name: NAC058
Matrix ID: MA0938.1
Class: GCM
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 24914054
Uniprot ID: Q9LS50  
Source: 24477691
Comment:

Sequence logo

Frequency matrix

         
A [ 116 107 120 28 23 31 177 162 ]
C [ 26 20 72 908 26 22 55 344 ]
G [ 88 245 693 38 694 34 674 124 ]
T [ 770 628 116 26 257 913 95 370 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0938.1 MA0938 1 NAC058 Arabidopsis thaliana
NAC GCM
MA0938.2 MA0938 2 NAC058 Arabidopsis thaliana
NAC GCM
MA0938.3 MA0938 3 NAC058 Arabidopsis thaliana
NAC GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0223.1

ChIP-seq Centrality
-log(P-value): 13124.1

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0223.1

ChIP-seq Centrality
-log(P-value): 13354.1

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: