Detailed information of matrix profile MA0938.1

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Profile summary
Name: NAC058
Matrix ID: MA0938.1
Class: GCM
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 24914054
Uniprot ID: Q9LS50  
Source: 24477691
Comment:

Sequence logo

Frequency matrix

         
A [ 370 95 913 257 26 116 628 770 ]
C [ 124 674 34 694 38 693 245 88 ]
G [ 344 55 22 26 908 72 20 26 ]
T [ 162 177 31 23 28 120 107 116 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0938.1 MA0938 1 NAC058 Arabidopsis thaliana
NAC GCM
MA0938.2 MA0938 2 NAC058 Arabidopsis thaliana
NAC GCM
MA0938.3 MA0938 3 NAC058 Arabidopsis thaliana
NAC GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0223.1

ChIP-seq Centrality
-log(P-value): 13124.1

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0223.1

ChIP-seq Centrality
-log(P-value): 13354.1

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: