Detailed information of matrix profile MA0931.1

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Profile summary
Name: ABI5
Matrix ID: MA0931.1
Class: Basic
Family: Group
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 12376636
Uniprot ID: Q9SJN0  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 336 70 999 0 0 0 0 78 167 306 ]
C [ 337 709 0 999 0 0 78 0 660 257 ]
G [ 164 70 0 0 999 0 922 314 87 257 ]
T [ 164 152 0 0 0 999 0 608 87 181 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0931.1 MA0931 1 ABI5 Arabidopsis thaliana
Group Basic
MA0931.2 MA0931 2 ABI5 Arabidopsis thaliana
Group Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0216.1

ChIP-seq Centrality
-log(P-value): 14413.8

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0216.1

ChIP-seq Centrality
-log(P-value): 14596.8

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: