Detailed information of matrix profile MA0868.1

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Profile summary
Name: SOX8
Matrix ID: MA0868.1
Class: High-mobility
Family: SOX-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 12920151
Uniprot ID: P57073  
Source: 23332764
Comment: Data

Sequence logo

Frequency matrix

         
A [ 460 460 0 460 2 0 2 89 460 37 460 1 0 0 0 7 ]
C [ 0 0 460 1 460 0 2 371 0 298 1 1 2 0 0 0 ]
G [ 4 0 0 0 0 0 460 41 0 7 0 1 0 460 0 0 ]
T [ 0 1 0 0 1 460 0 30 1 162 0 460 460 1 460 460 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0868.1 MA0868 1 SOX8 Homo sapiens
SOX-related High-mobility
MA0868.2 MA0868 2 SOX8 Homo sapiens
SOX-related High-mobility
MA0868.3 MA0868 3 SOX8 Homo sapiens
SOX-related High-mobility
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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