Detailed information of matrix profile MA0860.1

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Profile summary
Name: Rarg
Matrix ID: MA0860.1
Class: Nuclear
Family: Thyroid
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 15019979
Uniprot ID: P18911  
Source: 23332764
Comment: TF

Sequence logo

Frequency matrix

         
A [ 0 22 4540 319 1 2 57 479 595 780 0 0 4309 200 2 0 31 ]
C [ 6 2 0 5040 5891 838 2133 558 2442 386 12 0 12 5573 5888 267 806 ]
G [ 5 5340 2 8 0 32 58 482 1778 2677 3 6256 11 0 4 7 10 ]
T [ 4764 7 14 0 0 3603 2745 3248 314 1394 4044 2 0 0 0 4543 4074 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0860.1 MA0860 1 Rarg Mus musculus
Thyroid Nuclear
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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