Detailed information of matrix profile MA0768.1

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Profile summary
Name: LEF1
Matrix ID: MA0768.1
Class: High-mobility
Family: TCF-7-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 19443739
Uniprot ID: Q9UJU2  
Source: 23332764
Comment: Data

Sequence logo

Frequency matrix

         
A [ 601 655 697 5 699 9 14 711 709 712 33 197 309 367 366 ]
C [ 139 26 7 242 0 3 935 0 0 0 24 184 164 63 95 ]
G [ 215 207 34 1053 4 0 49 0 4 13 1068 851 559 88 77 ]
T [ 138 63 14 3 15 898 5 4 0 4 0 124 121 372 422 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0768.1 MA0768 1 LEF1 Homo sapiens
TCF-7-related High-mobility
MA0768.2 MA0768 2 Lef1 Mus musculus
TCF-7-related High-mobility
MA0768.3 MA0768 3 Lef1 Mus musculus
TCF-7-related High-mobility
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0184.1

ChIP-seq Centrality
-log(P-value): 224.821

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0184.1

ChIP-seq Centrality
-log(P-value): 216.602

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: