Detailed information of matrix profile MA0746.2

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Profile summary
Name: SP3
Matrix ID: MA0746.2
Class: C2H2
Family: Three-zinc
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 23019068
Uniprot ID: Q02447  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 1267 2146 664 160 5253 6 465 0 0 2 3430 556 1516 ]
C [ 1884 531 6591 6591 1338 6591 0 6591 6591 6591 3160 5116 2608 ]
G [ 1895 4445 226 54 2 0 6591 0 0 2 39 297 524 ]
T [ 1545 421 345 202 11 12 504 0 9 718 552 1475 1943 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0746.1 MA0746 1 SP3 Homo sapiens
Three-zinc C2H2
MA0746.2 MA0746 2 SP3 Homo sapiens
Three-zinc C2H2
MA0746.3 MA0746 3 SP3 Homo sapiens
Three-zinc C2H2
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0590.1

ChIP-seq Centrality
-log(P-value): 389.895

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0590.1

ChIP-seq Centrality
-log(P-value): 258.952

TFFM detailed summary logos

Description:

Alias:

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Included Models:

GC Content: