Detailed information of matrix profile MA0744.1

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Profile summary
Name: SCRT2
Matrix ID: MA0744.1
Class: C2H2
Family: More
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 11274425
Uniprot ID: Q9NQ03  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 271 238 1185 0 0 0 3 0 1 0 319 526 91 ]
C [ 561 1081 0 1482 1346 0 2 0 3 0 1217 30 469 ]
G [ 297 60 2 15 5 5 1391 0 15 1421 26 216 92 ]
T [ 146 108 3 0 136 1157 13 1151 1135 1 7 384 524 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0744.1 MA0744 1 SCRT2 Homo sapiens
More C2H2
MA0744.2 MA0744 2 SCRT2 Homo sapiens
More C2H2
MA0744.3 MA0744 3 SCRT2 Homo sapiens
More C2H2
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0581.1

ChIP-seq Centrality
-log(P-value): 57067.6

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0581.1

ChIP-seq Centrality
-log(P-value): 57255.3

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: