Detailed information of matrix profile MA0728.1

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Profile summary
Name: Nr2F6
Matrix ID: MA0728.1
Class: Nuclear
Family: RXR-related
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 12690040
Uniprot ID: P43136  
Source: 23332764
Comment: TF

Sequence logo

Frequency matrix

         
A [ 0 3 369 5 0 0 59 9 1 51 378 0 0 3 0 ]
C [ 9 0 0 155 324 0 94 7 0 1 1 183 210 53 172 ]
G [ 0 678 0 0 0 0 0 4 30 667 0 0 0 0 16 ]
T [ 446 0 2 0 0 258 165 406 494 0 0 1 0 265 100 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0728.1 MA0728 1 Nr2F6 Mus musculus
RXR-related Nuclear
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0776.1

ChIP-seq Centrality
-log(P-value): 7774.59

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0776.1

ChIP-seq Centrality
-log(P-value): 3685.85

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: