Detailed information of matrix profile MA0715.1

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Profile summary
Name: PROP1
Matrix ID: MA0715.1
Class: Homeo
Family: Paired-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585360
Uniprot ID: O75360  
Source: 23332764
Comment: Data

Sequence logo

Frequency matrix

         
A [ 47 575 575 6 33 258 367 575 0 11 575 ]
C [ 15 6 0 46 0 78 20 18 2 0 10 ]
G [ 0 18 0 3 38 57 209 39 0 0 12 ]
T [ 575 13 2 575 575 183 28 41 575 575 63 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0715.1 MA0715 1 PROP1 Homo sapiens
Paired-related Homeo
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0774.1

ChIP-seq Centrality
-log(P-value): 3111.18

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0774.1

ChIP-seq Centrality
-log(P-value): 3054.05

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: