Detailed information of matrix profile MA0703.2

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Profile summary
Name: LMX1B
Matrix ID: MA0703.2
Class: Homeo
Family: HD-LIM
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: O60663  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 609 0 4064 4064 0 0 4064 3465 2955 2058 663 ]
C [ 350 0 0 0 0 0 0 190 936 756 890 ]
G [ 785 12 0 0 0 0 0 599 548 680 617 ]
T [ 2319 4064 0 0 4064 4064 0 0 1109 2005 1894 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0703.1 MA0703 1 LMX1B Homo sapiens
HD-LIM Homeo
MA0703.2 MA0703 2 LMX1B Homo sapiens
HD-LIM Homeo
MA0703.3 MA0703 3 LMX1B Homo sapiens
HD-LIM Homeo
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0772.1

ChIP-seq Centrality
-log(P-value): 328.945

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0772.1

ChIP-seq Centrality
-log(P-value): 315.795

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: