Detailed information of matrix profile MA0653.1

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Profile summary
Name: IRF9
Matrix ID: MA0653.1
Class: Tryptophan
Family: Interferon-regulatory
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 21731497
Uniprot ID: Q00978  
Source: 23332764
Comment: Data

Sequence logo

Frequency matrix

         
A [ 2338 2 3 21 0 1 831 9 1 3 0 5 118 1076 110 ]
C [ 7 239 0 0 0 3467 0 197 0 0 1 3467 33 204 43 ]
G [ 1129 3467 0 1 2 0 3467 3467 2 0 5 3 3467 498 52 ]
T [ 99 4 3467 3467 3467 2 16 43 3467 3467 3467 43 49 2392 3467 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0653.1 MA0653 1 IRF9 Homo sapiens
Interferon-regulatory Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0757.1

ChIP-seq Centrality
-log(P-value): 6599.47

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0757.1

ChIP-seq Centrality
-log(P-value): 6504.27

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: