Detailed information of matrix profile MA0652.1

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Profile summary
Name: IRF8
Matrix ID: MA0652.1
Class: Tryptophan
Family: Interferon-regulatory
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 21731497
Uniprot ID: Q02556  
Source: 23332764
Comment: Data

Sequence logo

Frequency matrix

         
A [ 1309 63 3 5878 5878 5878 54 6 0 5878 5878 5878 11 321 ]
C [ 1996 5878 0 2 0 0 5878 5878 0 0 0 5 5878 1454 ]
G [ 571 19 5878 0 0 0 580 0 5878 3 2 0 1061 8 ]
T [ 2002 884 2 0 33 3 6 1228 0 0 68 0 15 5878 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0652.1 MA0652 1 IRF8 Homo sapiens
Interferon-regulatory Tryptophan
MA0652.2 MA0652 2 IRF8 Homo sapiens
Interferon-regulatory Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0511.1

ChIP-seq Centrality
-log(P-value): 13515.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0511.1

ChIP-seq Centrality
-log(P-value): 12414.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: