Detailed information of matrix profile MA0652.1

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Profile summary
Name: IRF8
Matrix ID: MA0652.1
Class: Tryptophan
Family: Interferon-regulatory
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 21731497
Uniprot ID: Q02556  
Source: 23332764
Comment: Data

Sequence logo

Frequency matrix

         
A [ 5878 15 0 68 0 0 1228 6 3 33 0 2 884 2002 ]
C [ 8 1061 0 2 3 5878 0 580 0 0 0 5878 19 571 ]
G [ 1454 5878 5 0 0 0 5878 5878 0 0 2 0 5878 1996 ]
T [ 321 11 5878 5878 5878 0 6 54 5878 5878 5878 3 63 1309 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0652.1 MA0652 1 IRF8 Homo sapiens
Interferon-regulatory Tryptophan
MA0652.2 MA0652 2 IRF8 Homo sapiens
Interferon-regulatory Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0511.1

ChIP-seq Centrality
-log(P-value): 13515.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0511.1

ChIP-seq Centrality
-log(P-value): 12414.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: