Detailed information of matrix profile MA0650.3

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Profile summary
Name: Hoxa13
Matrix ID: MA0650.3
Class: Homeo
Family: HOX
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 17200107
Uniprot ID: Q62424  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 4752 3644 247 212 832 16662 929 1439 1798 1317 4206 4481 ]
C [ 3026 2749 145 98 407 232 666 146 77 1889 4557 3868 ]
G [ 4214 3220 306 125 205 249 243 1594 14100 12600 4183 3314 ]
T [ 5256 7635 16550 16813 15804 105 15410 14069 1273 1442 4302 5585 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0650.1 MA0650 1 HOXA13 Homo sapiens
HOX Homeo
MA0650.2 MA0650 2 HOXA13 Homo sapiens
HOX Homeo
MA0650.3 MA0650 3 Hoxa13 Mus musculus
HOX Homeo
MA0650.4 MA0650 4 Hoxa13 Mus musculus
HOX Homeo
     

-log(P-value) = 1278.23

TFFM details

TFFM ID: TFFM0756.1

ChIP-seq Centrality
-log(P-value): 4579.44

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0756.1

ChIP-seq Centrality
-log(P-value): 4129.43

TFFM detailed summary logos

Description:

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Consensus:

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GC Content: