Detailed information of matrix profile MA0650.3

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Profile summary
Name: Hoxa13
Matrix ID: MA0650.3
Class: Homeo
Family: HOX
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 17200107
Uniprot ID: Q62424  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 5585 4302 1442 1273 14069 15410 105 15804 16813 16550 7635 5256 ]
C [ 3314 4183 12600 14100 1594 243 249 205 125 306 3220 4214 ]
G [ 3868 4557 1889 77 146 666 232 407 98 145 2749 3026 ]
T [ 4481 4206 1317 1798 1439 929 16662 832 212 247 3644 4752 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0650.1 MA0650 1 HOXA13 Homo sapiens
HOX Homeo
MA0650.2 MA0650 2 HOXA13 Homo sapiens
HOX Homeo
MA0650.3 MA0650 3 Hoxa13 Mus musculus
HOX Homeo
MA0650.4 MA0650 4 Hoxa13 Mus musculus
HOX Homeo
     

-log(P-value) = 1278.23

TFFM details

TFFM ID: TFFM0756.1

ChIP-seq Centrality
-log(P-value): 4579.44

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0756.1

ChIP-seq Centrality
-log(P-value): 4129.43

TFFM detailed summary logos

Description:

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Consensus:

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GC Content: