Detailed information of matrix profile MA0648.1

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Profile summary
Name: GSC
Matrix ID: MA0648.1
Class: Homeo
Family: Paired-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: P56915  
Source: 23332764
Comment: Data

Sequence logo

Frequency matrix

         
A [ 2168 1115 1099 787 6081 0 89 6081 1688 882 ]
C [ 619 1732 828 452 144 0 176 0 553 2039 ]
G [ 2197 2398 6081 6081 25 0 71 54 2885 1912 ]
T [ 1097 836 315 416 0 6081 6081 0 955 1249 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0648.1 MA0648 1 GSC Homo sapiens
Paired-related Homeo
MA0648.2 MA0648 2 GSC Homo sapiens
Paired-related Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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GC Content: