Detailed information of matrix profile MA0621.1

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Profile summary
Name: mix-a
Matrix ID: MA0621.1
Class: Homeo
Family: Paired-related
Collection: CORE
Taxon: Vertebrates
Species: Xenopus laevis
Data Type: PBM
Validation: 23332764
Uniprot ID: P21711  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 301 184 21 1000 1000 0 0 1000 679 244 229 ]
C [ 290 488 21 0 0 0 0 0 46 261 229 ]
G [ 205 100 21 0 0 0 0 0 146 150 229 ]
T [ 205 228 938 0 0 1000 1000 0 130 345 312 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0621.1 MA0621 1 mix-a Xenopus laevis
Paired-related Homeo
MA0621.2 MA0621 2 mix-a Xenopus laevis
Paired-related Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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GC Content: