Detailed information of matrix profile MA0592.2

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Profile summary
Name: Esrra
Matrix ID: MA0592.2
Class: Nuclear
Family: Steroid
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 17488637
Uniprot ID: O08580  
Source: 23332764
Comment: Data

Sequence logo

Frequency matrix

         
A [ 3630 2 42 4775 3 9 0 0 4 4775 4775 ]
C [ 55 293 211 52 4775 4775 4 4 404 57 1482 ]
G [ 350 6 4775 11 2 3 0 0 4775 339 696 ]
T [ 739 4775 0 6 0 1 4775 4775 33 131 110 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0592.1 MA0592 1 ESRRA Homo sapiens
Steroid Nuclear
MA0592.2 MA0592 2 Esrra Mus musculus
Steroid Nuclear
MA0592.3 MA0592 3 ESRRA Homo sapiens
Steroid Nuclear
MA0592.4 MA0592 4 ESRRA Homo sapiens
Steroid Nuclear
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0028.1

ChIP-seq Centrality
-log(P-value): 314.044

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0028.1

ChIP-seq Centrality
-log(P-value): 330.674

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: