Detailed information of matrix profile MA0587.1

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Profile summary
Name: TCP16
Matrix ID: MA0587.1
Class: TCP
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 22074922
Uniprot ID: Q9M1U4  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 6 7 0 0 1 9 0 0 60 1 ]
C [ 26 29 0 0 2 15 64 64 0 60 ]
G [ 20 10 64 64 60 8 0 0 3 0 ]
T [ 12 18 0 0 1 32 0 0 1 3 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0587.1 MA0587 1 TCP16 Arabidopsis thaliana
TCP
MA0587.2 MA0587 2 TCP16 Arabidopsis thaliana
TCP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: