Detailed information of matrix profile MA0585.1

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Profile summary
Name: AGL1
Matrix ID: MA0585.1
Class: MADS
Family: Type
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 8597661
Uniprot ID: P29381  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 13 9 3 28 5 2 14 28 34 21 22 22 0 0 17 51 38 18 ]
C [ 19 8 4 5 56 56 28 9 2 1 8 7 1 0 22 9 9 15 ]
G [ 15 9 10 6 0 0 8 14 3 1 4 6 63 65 5 1 6 11 ]
T [ 18 39 48 26 4 7 15 14 26 42 31 30 1 0 21 4 12 21 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0585.1 MA0585 1 AGL1 Arabidopsis thaliana
Type MADS
MA0585.2 MA0585 2 AGL1 Arabidopsis thaliana
Type MADS
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: