Detailed information of matrix profile MA0577.3

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Profile summary
Name: SPL3
Matrix ID: MA0577.3
Class: C3H(C),C2HC
Family: SBP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 10524240 16554053
Uniprot ID: P93015  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 213 316 119 39 13 3 2 935 5 516 319 ]
C [ 226 122 15 872 856 1 3 10 928 85 143 ]
G [ 171 275 56 5 6 939 3 3 6 241 288 ]
T [ 340 237 760 34 75 7 942 2 11 108 200 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0577.1 MA0577 1 SPL3 Arabidopsis thaliana
SBP C3H(C),C2HC
MA0577.2 MA0577 2 SPL3 Arabidopsis thaliana
SBP C3H(C),C2HC
MA0577.3 MA0577 3 SPL3 Arabidopsis thaliana
SBP C3H(C),C2HC
MA0577.4 MA0577 4 SPL3 Arabidopsis thaliana
SBP C3H(C),C2HC
     

-log(P-value) = 730.839

TFFM details

TFFM ID: TFFM0742.1

ChIP-seq Centrality
-log(P-value): 725.669

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0742.1

ChIP-seq Centrality
-log(P-value): 719.024

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: