Detailed information of matrix profile MA0577.1

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Profile summary
Name: SPL3
Matrix ID: MA0577.1
Class: C3H(C),C2HC
Family: SBP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 16095614
Uniprot ID: P93015  
Source:
Comment: No

Sequence logo

Frequency matrix

         
A [ 10 15 14 13 13 10 0 0 34 0 1 5 10 14 16 9 ]
C [ 3 0 2 4 2 7 0 0 0 34 2 1 13 6 8 9 ]
G [ 12 7 8 9 6 7 34 0 0 0 29 15 1 0 2 3 ]
T [ 9 12 10 8 13 10 0 34 0 0 2 13 10 14 8 13 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0577.1 MA0577 1 SPL3 Arabidopsis thaliana
SBP C3H(C),C2HC
MA0577.2 MA0577 2 SPL3 Arabidopsis thaliana
SBP C3H(C),C2HC
MA0577.3 MA0577 3 SPL3 Arabidopsis thaliana
SBP C3H(C),C2HC
MA0577.4 MA0577 4 SPL3 Arabidopsis thaliana
SBP C3H(C),C2HC
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: