Detailed information of matrix profile MA0571.1

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Profile summary
Name: ANT
Matrix ID: MA0571.1
Class: AP2/EREBP
Family: AP2
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 11058102
Uniprot ID: Q38914  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 8 8 6 19 1 10 0 1 1 0 5 31 17 5 0 0 1 2 2 9 12 ]
C [ 3 4 14 3 29 16 0 13 0 0 0 0 1 15 13 0 2 0 24 13 12 ]
G [ 4 10 6 10 1 1 0 11 33 34 25 3 1 6 0 34 0 32 0 7 4 ]
T [ 19 12 8 2 3 7 34 9 0 0 4 0 15 8 21 0 31 0 8 5 6 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0571.1 MA0571 1 ANT Arabidopsis thaliana
AP2 AP2/EREBP
MA0571.2 MA0571 2 ANT Arabidopsis thaliana
AP2 AP2/EREBP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: