Detailed information of matrix profile MA0571.1

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Profile summary
Name: ANT
Matrix ID: MA0571.1
Class: AP2/EREBP
Family: AP2
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 11058102
Uniprot ID: Q38914  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 6 5 8 0 31 0 21 8 15 0 4 0 0 9 34 7 3 2 8 12 19 ]
C [ 4 7 0 32 0 34 0 6 1 3 25 34 33 11 0 1 1 10 6 10 4 ]
G [ 12 13 24 0 2 0 13 15 1 0 0 0 0 13 0 16 29 3 14 4 3 ]
T [ 12 9 2 2 1 0 0 5 17 31 5 0 1 1 0 10 1 19 6 8 8 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0571.1 MA0571 1 ANT Arabidopsis thaliana
AP2 AP2/EREBP
MA0571.2 MA0571 2 ANT Arabidopsis thaliana
AP2 AP2/EREBP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: