Detailed information of matrix profile MA0558.1

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Profile summary
Name: FLC
Matrix ID: MA0558.1
Class: MADS
Family: Type
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-seq
Validation: 21464308
Uniprot ID: Q5Q9J1  
Source:
Comment: TF

Sequence logo

Frequency matrix

         
A [ 93 102 22 2 0 31 0 0 171 61 36 11 29 33 77 16 106 131 122 61 65 ]
C [ 29 17 148 15 4 6 275 134 15 18 3 3 38 37 4 12 66 36 21 63 45 ]
G [ 50 47 43 1 3 21 0 0 11 3 3 0 10 70 185 193 25 26 37 61 44 ]
T [ 103 109 62 257 268 217 0 141 78 193 233 261 198 135 9 54 78 82 95 90 121 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0558.1 MA0558 1 FLC Arabidopsis thaliana
Type MADS
MA0558.2 MA0558 2 FLC Arabidopsis thaliana
Type MADS
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0483.1

ChIP-seq Centrality
-log(P-value): 305.639

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0483.1

ChIP-seq Centrality
-log(P-value): 294.925

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: