Detailed information of matrix profile MA0552.2

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Profile summary
Name: PIF1
Matrix ID: MA0552.2
Class: Basic
Family: bHLH
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-chip
Validation: 15448264
Uniprot ID: Q8GZM7  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 0 114 0 0 0 0 ]
C [ 103 0 113 0 2 0 ]
G [ 11 0 1 114 0 114 ]
T [ 0 0 0 0 112 0 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0552.1 MA0552 1 PIF1 Arabidopsis thaliana
bHLH Basic
MA0552.2 MA0552 2 PIF1 Arabidopsis thaliana
bHLH Basic
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: