Detailed information of matrix profile MA0545.1

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Profile summary
Name: hlh-1
Matrix ID: MA0545.1
Class: Basic
Family: MyoD/ASC-related
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 1338434 7939715
Uniprot ID: P22980  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 71 306 289 0 381 68 23 0 0 97 0 ]
C [ 139 22 15 381 0 13 264 3 0 75 261 ]
G [ 148 53 72 0 0 297 12 0 381 77 22 ]
T [ 23 0 5 0 0 3 82 378 0 132 98 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0545.1 MA0545 1 hlh-1 Caenorhabditis elegans
MyoD/ASC-related Basic
MA0545.2 MA0545 2 hlh-1 Caenorhabditis elegans
MyoD/ASC-related Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0501.1

ChIP-seq Centrality
-log(P-value): 718.055

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0501.1

ChIP-seq Centrality
-log(P-value): 748.898

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: