Detailed information of matrix profile MA0538.2

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Profile summary
Name: daf-12
Matrix ID: MA0538.2
Class: Other
Family: C4-GATA-related
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 15375261
Uniprot ID: G5EFF5  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 91 40 61 1 155 39 102 0 104 0 75 0 72 1 ]
C [ 28 84 16 154 0 97 14 156 0 156 6 123 13 113 ]
G [ 20 0 79 1 0 20 25 0 52 0 52 0 0 20 ]
T [ 17 32 0 0 1 0 15 0 0 0 23 33 71 22 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0538.1 MA0538 1 daf-12 Caenorhabditis elegans
C4-GATA-related Other
MA0538.2 MA0538 2 daf-12 Caenorhabditis elegans
C4-GATA-related Other
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: