Detailed information of matrix profile MA0531.1

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Profile summary
Name: CTCF
Matrix ID: MA0531.1
Class: C2H2
Family: More
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: ChIP-chip
Validation: 17616980
Uniprot ID: Q9VS55  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 754 301 94 130 248 0 1585 3 0 175 844 92 236 223 317 ]
C [ 144 8 1807 3 1652 1902 311 912 1700 192 87 350 826 219 403 ]
G [ 773 1514 0 1645 0 0 4 0 0 1 714 784 383 1147 876 ]
T [ 231 79 1 124 2 0 2 987 202 1534 257 676 457 313 306 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0531.1 MA0531 1 CTCF Drosophila melanogaster
More C2H2
MA0531.2 MA0531 2 CTCF Drosophila melanogaster
More C2H2
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0461.1

ChIP-seq Centrality
-log(P-value): 1389.77

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0461.1

ChIP-seq Centrality
-log(P-value): 1442.63

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: