Detailed information of matrix profile MA0531.1

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Profile summary
Name: CTCF
Matrix ID: MA0531.1
Class: C2H2
Family: More
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: ChIP-chip
Validation: 17616980
Uniprot ID: Q9VS55  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 306 313 457 676 257 1534 202 987 2 0 2 124 1 79 231 ]
C [ 876 1147 383 784 714 1 0 0 4 0 0 1645 0 1514 773 ]
G [ 403 219 826 350 87 192 1700 912 311 1902 1652 3 1807 8 144 ]
T [ 317 223 236 92 844 175 0 3 1585 0 248 130 94 301 754 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0531.1 MA0531 1 CTCF Drosophila melanogaster
More C2H2
MA0531.2 MA0531 2 CTCF Drosophila melanogaster
More C2H2
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0461.1

ChIP-seq Centrality
-log(P-value): 1389.77

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0461.1

ChIP-seq Centrality
-log(P-value): 1442.63

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: