Detailed information of matrix profile MA0499.2

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Profile summary
Name: MYOD1
Matrix ID: MA0499.2
Class: Basic
Family: MyoD/ASC-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 20412780
Uniprot ID: P15172  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 9358 8151 9000 29644 238 33130 330 1226 587 269 2245 9291 7728 ]
C [ 7495 6202 4440 1699 33468 366 932 7336 849 354 21884 8444 8118 ]
G [ 11760 10485 19052 2555 386 563 32504 25275 583 33328 5622 7103 11279 ]
T [ 5687 9462 1808 402 208 241 534 463 32281 349 4549 9462 7175 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0499.1 MA0499 1 Myod1 Mus musculus
MyoD/ASC-related Basic
MA0499.2 MA0499 2 MYOD1 Homo sapiens
MyoD/ASC-related Basic
MA0499.3 MA0499 3 MYOD1 Homo sapiens
MyoD/ASC-related Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0068.2

ChIP-seq Centrality
-log(P-value): 54540.1

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0068.2

ChIP-seq Centrality
-log(P-value): 54679.8

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: