Detailed information of matrix profile MA0139.2

  1. Home
  2. Matrix > MA0139.2

Profile summary
Name: CTCF
Matrix ID: MA0139.2
Class: C2H2
Family: More
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 17512414
Uniprot ID: P49711  
Source:
Comment: TF

Sequence logo

Frequency matrix

         
A [ 37 17 67 71 8 341 9 3 18 324 11 91 2 36 134 ]
C [ 307 507 5 775 890 504 566 903 32 48 334 65 0 21 449 ]
G [ 482 13 733 8 0 12 3 0 11 433 528 13 903 800 49 ]
T [ 82 372 104 56 12 54 333 5 851 107 40 744 8 56 281 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0139.1 MA0139 1 CTCF Homo sapiens
More C2H2
MA0139.2 MA0139 2 CTCF Homo sapiens
More C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: