Detailed information of deep learning profile BP001177.1

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This page shows detailed deep learning-derived predictions and motifs for FOXA1 in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP001177.1
Cell line/tissue: liver
Class: Fork head/winged helix factors
Family: FOX
JASPAR ID: MA0148.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR735KEY
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Contribution weight matrix (CWM)

     
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Frequency matrix

         
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Hypothetical CWM

       
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Other motifs identified by TF-MoDISco

Number of seqlets: 3360

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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Number of seqlets: 27

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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Number of seqlets: 2981

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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G [ ]
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CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
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Number of seqlets: 1374

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: 725

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: 410

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: 122

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: 40

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: 30

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: 29

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Unique motifs

This is a placeholder for the motifs that are found to be specific to this particular model, i.e., not found in other models trained for FOXA1.

12 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000081.1 FOXA1 ENCSR000BKW Ishikawa Homo sapiens MA0148.5
BP000082.1 FOXA1 ENCSR000BKY T47D Homo sapiens MA0148.5
BP000083.1 FOXA1 ENCSR000BLE HepG2 Homo sapiens MA0148.5
BP000097.1 FOXA1 ENCSR000BMO HepG2 Homo sapiens MA0148.5
BP000125.1 FOXA1 ENCSR000BPX A549 Homo sapiens MA0148.5
BP000143.1 FOXA1 ENCSR000BRD A549 Homo sapiens MA0148.5
BP000580.1 FOXA1 ENCSR094WHO HEK293T Homo sapiens MA0148.5
BP000613.1 FOXA1 ENCSR126YEB MCF-7 Homo sapiens MA0148.5
BP000755.1 FOXA1 ENCSR267DFA HepG2 Homo sapiens MA0148.5
BP000802.1 FOXA1 ENCSR324RCI liver Homo sapiens MA0148.5
Showing 10 profiles of page 1 from 2 pages