Detailed information of deep learning profile BP000975.1

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This page shows detailed deep learning-derived predictions and motifs for SRF in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SRF
Model ID: BP000975.1
Cell line/tissue: HepG2
Class: MADS box factors
Family: Responders to external signals (SRF/RLM1)
JASPAR ID: MA0083.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P11831  
Source: ENCSR516SMM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Contribution weight matrix (CWM)

     
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
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Frequency matrix

         
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Hypothetical CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Other motifs identified by TF-MoDISco

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Unique motifs

This is a placeholder for the motifs that are found to be specific to this particular model, i.e., not found in other models trained for SRF.

11 profiles found for the same TF (SRF) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000022.1 SRF ENCSR000BGE GM12878 Homo sapiens MA0083.3
BP000053.1 SRF ENCSR000BIV H1 Homo sapiens MA0083.3
BP000086.1 SRF ENCSR000BLK K562 Homo sapiens MA0083.3
BP000090.1 SRF ENCSR000BLV HepG2 Homo sapiens MA0083.3
BP000095.1 SRF ENCSR000BMI GM12878 Homo sapiens MA0083.3
BP000156.1 SRF ENCSR000BSC HCT116 Homo sapiens MA0083.3
BP000175.1 SRF ENCSR000BTD Ishikawa Homo sapiens MA0083.3
BP000202.1 SRF ENCSR000BVA MCF-7 Homo sapiens MA0083.3
BP000531.1 SRF ENCSR041XML GM12878 Homo sapiens MA0083.3
BP000963.1 SRF ENCSR504HOI K562 Homo sapiens MA0083.3
Showing 10 profiles of page 1 from 2 pages