Detailed information of deep learning profile BP000413.1

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This page shows detailed deep learning-derived predictions and motifs for RFX5 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: RFX5
Model ID: BP000413.1
Cell line: K562
Class: Fork head/winged helix factors
Family: RFX-related factors
JASPAR ID: MA0510.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P48382  
Source: ENCODE
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Contribution weight matrix (CWM)

     
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Frequency matrix

         
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Hypothetical CWM

       
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Other motifs identified by TF-MoDISco

Number of seqlets:

PFM

       
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CWM

       
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HCWM

       
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Number of seqlets:

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CWM

       
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HCWM

       
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Number of seqlets:

PFM

       
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CWM

       
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HCWM

       
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Number of seqlets:

PFM

       
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CWM

       
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HCWM

       
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Number of seqlets:

PFM

       
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CWM

       
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HCWM

       
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Number of seqlets:

PFM

       
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CWM

       
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HCWM

       
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Number of seqlets:

PFM

       
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CWM

       
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HCWM

       
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Number of seqlets:

PFM

       
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CWM

       
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C [ ]
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HCWM

       
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Number of seqlets:

PFM

       
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C [ ]
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CWM

       
A [ ]
C [ ]
G [ ]
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HCWM

       
A [ ]
C [ ]
G [ ]
T [ ]

Number of seqlets:

PFM

       
A [ ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ ]
C [ ]
G [ ]
T [ ]

Number of seqlets:

PFM

       
A [ ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ ]
C [ ]
G [ ]
T [ ]

Number of seqlets:

PFM

       
A [ ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ ]
C [ ]
G [ ]
T [ ]

Number of seqlets:

PFM

       
A [ ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ ]
C [ ]
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Unique motifs

7 profiles found for the same TF (RFX5) in other cell types/tissues

Display profiles


Model ID Name Cell line Species JASPAR ID Sequence logo
BP000339.1 RFX5 GM12878 Homo sapiens MA0510.3
BP000359.1 RFX5 H1 Homo sapiens MA0510.3
BP000379.1 RFX5 HepG2 Homo sapiens MA0510.3
BP000394.1 RFX5 IMR-90 Homo sapiens MA0510.3
BP000427.1 RFX5 SK-N-SH Homo sapiens MA0510.3
BP000546.1 RFX5 A549 Homo sapiens MA0510.3
BP001353.1 RFX5 MCF-7 Homo sapiens MA0510.3
Showing 7 profiles of page 1 from 1 pages
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