Detailed information of deep learning profile BP000272.1

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This page shows detailed deep learning-derived predictions and motifs for CTCF in AG10803 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CTCF
Model ID: BP000272.1
Cell line/tissue: AG10803
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA0139.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49711  
Source: ENCSR000DPV
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Contribution weight matrix (CWM)

     
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Frequency matrix

       
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Hypothetical CWM

     
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Other motifs identified by TF-MoDISco

Number of seqlets: 256

CWM

       
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PFM

       
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HCWM

     
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Number of seqlets: 42

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
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PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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G [ ]
T [ ]

HCWM

     
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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Number of seqlets: 42

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

     
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
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Number of seqlets: 31

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

     
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: 31

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

     
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: 22

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

     
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Unique motifs

This is a placeholder for the motifs that are found to be specific to this particular model, i.e., not found in other models trained for CTCF.

448 profiles found for the same TF (CTCF) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000725.1 CTCF ENCSR243INX PC-9 Homo sapiens MA0139.2
BP000726.1 CTCF ENCSR244KEW middle frontal area 46 Homo sapiens MA0139.2
BP000729.1 CTCF ENCSR249JOH A549 Homo sapiens MA0139.2
BP000730.1 CTCF ENCSR251BHU middle frontal area 46 Homo sapiens MA0139.2
BP000731.1 CTCF ENCSR252QYR hepatocyte Homo sapiens MA0139.2
BP000732.1 CTCF ENCSR252XWG lower leg skin Homo sapiens MA0139.2
BP000733.1 CTCF ENCSR253ALG pancreas Homo sapiens MA0139.2
BP000735.1 CTCF ENCSR254YRM liver Homo sapiens MA0139.2
BP000737.1 CTCF ENCSR255SQR left lung Homo sapiens MA0139.2
BP000739.1 CTCF ENCSR259PNW middle frontal area 46 Homo sapiens MA0139.2
Showing 10 profiles of page 20 from 45 pages