Detailed information of deep learning profile BP000269.1

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This page shows detailed deep learning-derived predictions and motifs for CTCF in AG04450 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CTCF
Model ID: BP000269.1
Cell line/tissue: AG04450
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA0139.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49711  
Source: ENCSR000DPM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Contribution weight matrix (CWM)

     
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Frequency matrix

       
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Hypothetical CWM

     
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Other motifs identified by TF-MoDISco

Number of seqlets: 725

CWM

       
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PFM

       
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HCWM

     
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Number of seqlets: 401

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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HCWM

     
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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Number of seqlets: 65

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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HCWM

     
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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Number of seqlets: 30

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

     
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: 28

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

     
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: 28

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

     
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Unique motifs

This is a placeholder for the motifs that are found to be specific to this particular model, i.e., not found in other models trained for CTCF.

448 profiles found for the same TF (CTCF) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000609.1 CTCF ENCSR125DKL SU-DHL-6 Homo sapiens MA0139.2
BP000611.1 CTCF ENCSR125NBL neural progenitor cell Homo sapiens MA0139.2
BP000615.1 CTCF ENCSR130TQM A549 Homo sapiens MA0139.2
BP000617.1 CTCF ENCSR133AFF lower lobe of left lung Homo sapiens MA0139.2
BP000622.1 CTCF ENCSR138FTN heart right ventricle Homo sapiens MA0139.2
BP000626.1 CTCF ENCSR145HBC thyroid gland Homo sapiens MA0139.2
BP000629.1 CTCF ENCSR146BGM gastroesophageal sphincter Homo sapiens MA0139.2
BP000637.1 CTCF ENCSR160GVO HCT116 Homo sapiens MA0139.2
BP000639.1 CTCF ENCSR162KZY CD14-positive monocyte Homo sapiens MA0139.2
BP000642.1 CTCF ENCSR163ULN HFFc6 Homo sapiens MA0139.2
Showing 10 profiles of page 16 from 45 pages