Detailed information of deep learning profile BP000081.1

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This page shows detailed deep learning-derived predictions and motifs for FOXA1 in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP000081.1
Cell line/tissue: Ishikawa
Class: Fork head/winged helix factors
Family: FOX
JASPAR ID: MA0148.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR000BKW
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Contribution weight matrix (CWM)

     
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Frequency matrix

         
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Hypothetical CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Other motifs identified by TF-MoDISco

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Number of seqlets: To be filled.

PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

HCWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
C [ ]
G [ ]
T [ ]

Unique motifs

This is a placeholder for the motifs that are found to be specific to this particular model, i.e., not found in other models trained for FOXA1.

12 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000082.1 FOXA1 ENCSR000BKY T47D Homo sapiens MA0148.5
BP000083.1 FOXA1 ENCSR000BLE HepG2 Homo sapiens MA0148.5
BP000097.1 FOXA1 ENCSR000BMO HepG2 Homo sapiens MA0148.5
BP000125.1 FOXA1 ENCSR000BPX A549 Homo sapiens MA0148.5
BP000143.1 FOXA1 ENCSR000BRD A549 Homo sapiens MA0148.5
BP000580.1 FOXA1 ENCSR094WHO HEK293T Homo sapiens MA0148.5
BP000613.1 FOXA1 ENCSR126YEB MCF-7 Homo sapiens MA0148.5
BP000755.1 FOXA1 ENCSR267DFA HepG2 Homo sapiens MA0148.5
BP000802.1 FOXA1 ENCSR324RCI liver Homo sapiens MA0148.5
BP001177.1 FOXA1 ENCSR735KEY liver Homo sapiens MA0148.5
Showing 10 profiles of page 1 from 2 pages