Detailed information of deep learning profile BP000011.1

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This page shows detailed deep learning-derived predictions and motifs for CTCF in myotube using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CTCF
Model ID: BP000011.1
Cell line/tissue: myotube
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA0139.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49711  
Source: ENCSR000ANS
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

Contribution weight matrix (CWM)

     
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Frequency matrix

       
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Hypothetical CWM

     
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Other motifs identified by TF-MoDISco

Number of seqlets: 717

CWM

       
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PFM

       
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HCWM

     
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Number of seqlets: 46

CWM

       
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PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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HCWM

     
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Number of seqlets: 57

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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HCWM

     
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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Number of seqlets: 51

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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HCWM

     
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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Number of seqlets: 22

CWM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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PFM

       
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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HCWM

     
A [ A placeholder to be filled. All the buttons will become functional after matrix data is populated. ]
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Unique motifs

This is a placeholder for the motifs that are found to be specific to this particular model, i.e., not found in other models trained for CTCF.

448 profiles found for the same TF (CTCF) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000829.1 CTCF ENCSR352EIC HCT116 Homo sapiens MA0139.2
BP000831.1 CTCF ENCSR353DFU esophagus muscularis mucosa Homo sapiens MA0139.2
BP000832.1 CTCF ENCSR355ALW gastrocnemius medialis Homo sapiens MA0139.2
BP000833.1 CTCF ENCSR355PMV heart left ventricle Homo sapiens MA0139.2
BP000834.1 CTCF ENCSR359LOD PC-3 Homo sapiens MA0139.2
BP000836.1 CTCF ENCSR361KVZ stomach Homo sapiens MA0139.2
BP000842.1 CTCF ENCSR369RRE middle frontal area 46 Homo sapiens MA0139.2
BP000845.1 CTCF ENCSR372JWF middle frontal area 46 Homo sapiens MA0139.2
BP000847.1 CTCF ENCSR374PKX middle frontal area 46 Homo sapiens MA0139.2
BP000849.1 CTCF ENCSR375VXU Peyer's patch Homo sapiens MA0139.2
Showing 10 profiles of page 24 from 45 pages