JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0297.1 FKH2 Saccharomyces cerevisiae Fork FOX
MA0299.1 GAL4 Saccharomyces cerevisiae C6
MA0300.1 GAT1 Saccharomyces cerevisiae Other C4-GATA-related
MA0300.2 GAT1 Saccharomyces cerevisiae Other C4-GATA-related
MA0301.1 GAT3 Saccharomyces cerevisiae Other C4-GATA-related
MA0301.2 GAT3 Saccharomyces cerevisiae Other C4-GATA-related
MA0302.1 GAT4 Saccharomyces cerevisiae Other C4-GATA-related
MA0302.2 GAT4 Saccharomyces cerevisiae Other C4-GATA-related
MA0303.1 GCN4 Saccharomyces cerevisiae Basic
MA0303.2 GCN4 Saccharomyces cerevisiae Basic
Showing 10 profiles of page 61 from 428 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.