JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1624.1 Stat5a Mus musculus STAT STAT
MA1624.2 Stat5a Mus musculus STAT STAT
MA1625.1 Stat5b Mus musculus STAT STAT
MA1625.2 Stat5b Mus musculus STAT STAT
MA1627.1 Wt1 Mus musculus C2H2 More
MA1627.2 Wt1 Mus musculus C2H2 More
MA1628.1 Zic1::Zic2 Mus musculus C2H2 More
MA1628.2 Zic1::Zic2 Mus musculus C2H2 More
MA1629.1 Zic2 Mus musculus C2H2 More
MA1629.2 Zic2 Mus musculus C2H2 More
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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.