JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1530.2 NKX6-3 Homo sapiens Homeo NK
MA1531.1 NR1D1 Homo sapiens Nuclear Thyroid
MA1531.2 NR1D1 Homo sapiens Nuclear Thyroid
MA1532.1 NR1D2 Homo sapiens Nuclear Thyroid
MA1532.2 NR1D2 Homo sapiens Nuclear Thyroid
MA1533.1 NR1I2 Homo sapiens Nuclear Thyroid
MA1533.2 NR1I2 Homo sapiens Nuclear Thyroid
MA1534.1 NR1I3 Homo sapiens Nuclear Thyroid
MA1534.2 NR1I3 Homo sapiens Nuclear Thyroid
MA1535.1 NR2C1 Homo sapiens Nuclear RXR-related
Showing 10 profiles of page 294 from 428 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


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Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.