JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1495.1 HOXA1 Homo sapiens Homeo HOX
MA1495.2 HOXA1 Homo sapiens Homeo HOX
MA1496.1 HOXA4 Homo sapiens Homeo HOX
MA1496.2 HOXA4 Homo sapiens Homeo HOX
MA1497.1 HOXA6 Homo sapiens Homeo HOX
MA1497.2 HOXA6 Homo sapiens Homeo HOX
MA1498.1 HOXA7 Homo sapiens Homeo HOX
MA1498.2 HOXA7 Homo sapiens Homeo HOX
MA1498.3 HOXA7 Homo sapiens Homeo HOX
MA1499.1 HOXB4 Homo sapiens Homeo HOX
Showing 10 profiles of page 287 from 428 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


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Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.